Job Description P0C8J6 Confidence 96.24% Date Thu Jan 5 11:30:05 GMT 2012 Rank 94 Aligned Residues 162 % Identity 19% Template d1vjia_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																																							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	A	W	K	P	I	V	D	A	V	H	A	K	G	G	I	F	F	C	Q	I	W	H	V	G	R	V	S	N	S	G	F	Q	P	N	G	K	A	P	I	S	C	S	D	K	P	L	M	P	Q	I	R	S	N	G	I	D	E	A	L	F	T	P	P	R	R	L	G	I	E	E	I	P	G	I	V	N	D	F
Template Known Secondary structure															T	T											T	T	S	S		G	G	G	S	G	G	G						S	S				S		T	T		B		S	S	S	S	S	B	S	S								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.
Template Sequence		R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	R	N	A	M	E	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	I	D	Q	F	M	K	D	T	V	N	D	R	T	D	E	Y	G	G	S	L	Q	N	R	C	K	F	P	L	E	I	V	D	A	V	A	K	.	.	.
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T		S								T	T	S								T	T	T					S	T	T	S	S	S																		.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.
Template SS confidence
		166	.																		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure									.	.																														.	.	.
Query SS confidence									.	.																														.	.	.
Query Sequence		S	V	E	A	E	L	G	.	.	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	.	.	.	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P
Query Conservation									.	.																														.	.	.
Alig confidence		.	.	.	.				.	.																														.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	E	I	G	P	D	R	V	G	I	R	L	S	P	F	A	D	Y	M	E	S	G	D	T	N	P	G	A	L	G	L	Y	M	A	E	S	L	N	K	Y	G	I	L	Y	C	H	V	I	E	A	R	M	H	T	.	.	.	.	.	.	.	.	.	.	.	.	L	M	P	M	R	K	A	F	K	G	T
Template Known Secondary structure		.	.	.	.				G	G	G							T	T			T	T	T				S	S												T	T	T	T	T		S												.	.	.	.	.	.	.	.	.	.	.	.										S
Template Predicted Secondary structure		.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.													.	280	.	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		F	I	S	A	G	G	.	.	F	T	R	E	D	G	N	E	A	V	S	K	G	R	T
Template Known Secondary structure						S	S	.	.												T	T	S
Template Predicted Secondary structure								.	.
Template SS confidence
		300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions