Job Description P0C8J6 Confidence 79.29% Date Thu Jan 5 11:30:05 GMT 2012 Rank 297 Aligned Residues 214 % Identity 15% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	Q	M	L	N	N	A	Q	R	G	G	Y	A	V	P	A	F	.	.	.	N	I	H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A
Query Conservation																				.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																		.				.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.				.
Template Sequence		L	E	A	F	A	K	A	R	S	E	G	R	A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	P	.	Y	A	D	.	L	L	E	I	G	L	P	Y	S	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V	Q	G	A	L	E	L	V	R	E
Template Known Secondary structure											T	T	B									T	T	S	S													G	G	.	G		S	.	S																							T	T
Template Predicted Secondary structure																																								.				.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	.	.	.	.	.	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																						.	.								.	.	.	.																.	.	.								.	.
Template Conservation																																										.	.								.	.	.	.																.	.	.								.	.
Template Sequence		V	R	A	L	T	E	K	P	L	F	L	M	T	Y	L	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	.	.	P	D	L	P	P	D	E	.	.	.	.	D	P	G	L	V	R	L	A	Q	E	I	G	L	E	T	.	.	.	V	F	L	L	A	P	T	.	.
Template Known Secondary structure								S																											T							.	.	T	T			G	G	G	.	.	.	.												T				.	.	.						T	T	.	.
Template Predicted Secondary structure																																										.	.								.	.	.	.																.	.	.								.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																												.					.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																												.					.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	T	D	A	R	I	A	T	V	V	R	H	A	T	G	F	V	Y	A	V	S	V	E	.	.	.	.	.	.	.	.	.	.	.	.	V	K	D	L	V	R	R	I	K	A	R	T	A	L	P	V	A	V	G	F	G	V	S	G	K	A	T	.	A	A	Q	A	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											T	T			S									.	.	.	.	.	.	.	.	.	.	.	.										T	T			S						S				S				.					.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																												.					.	.
Template SS confidence
													155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.													.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	I	C	K	I	N	V	A	T	E	L	K	N	A	F	S	Q	A	L	K	N	Y	L	T	E	H	P	E	A	T	D	P	R	D	Y	L	Q	S	A	K	S	A	M	R	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.											.	.	.
Template Conservation												.	.	.	.	.	.	.	.											.	.	.
Template Sequence		A	V	A	D	G	V	V	V	G	S	.	.	.	.	.	.	.	.	A	L	V	R	A	L	E	E	G	R	.	.	.	S	L	A	P	L	L	Q	E	I	R	Q	G	L	Q	R
Template Known Secondary structure		T	T	S	S							.	.	.	.	.	.	.	.								T	T		.	.	.														B
Template Predicted Secondary structure												.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230									.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions