Job Description P0C8J6 Confidence 95.37% Date Thu Jan 5 11:30:05 GMT 2012 Rank 125 Aligned Residues 147 % Identity 14% Template d1twda_ SCOP info TIM beta/alpha-barrel CutC-like CutC-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.												.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																							.					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	.	H	T	K	F	.	.	.	.	.	.	.	.	.	.	.	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S
Query Conservation																							.					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.					.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation																																																																																.	.
Template Sequence		L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	X	P	R	X	E	K	I	X	A	A	A	G	P	L	A	.	.
Template Known Secondary structure														S					B			S	S	S	S		S																				T	T		S							B		T	T	S	S	B													T	T	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.																											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	F	H	R	A	F	D	X	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	G	Q	.	.	.	.	.	.	K	S	D	A	L	Q	G	L	S	K	I	X	E	L	I	A	H	R	D	A	P	I	I	X	A	G	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	G	G		S													T								T	T	.	.	.	.	.	.	S	S	S	T	T	T	T									T	S	S	S								.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.																											.
Template SS confidence
																118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S
Template Known Secondary structure		S	S			T	T	T								T		S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions