Job Description P0C8J6 Confidence 97.76% Date Thu Jan 5 11:30:05 GMT 2012 Rank 43 Aligned Residues 229 % Identity 15% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																		.	.	60	.	.
Predicted Secondary structure																	.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	T	K	Q	M	L	N	N	A	Q	R	G	G	Y	.	A	V	P	A	F	N	.	.	.	I	H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	E	N	L
Query Conservation																	.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	V	S	D	T	M	A	A	L	M	A	K	G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V
Template Known Secondary structure														T	T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	.	.	.	.	.	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.					.	.	.	.																		.	.						.	.	.	.																					.
Template Conservation																													.	.	.	.																		.	.						.	.	.	.																					.
Template Sequence		L	E	M	L	R	E	V	T	P	E	L	S	C	P	V	V	L	L	S	Y	Y	K	P	I	M	F	R	.	.	.	.	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	.	.	L	P	Y	V	A	.	.	.	.	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L	V	L	L	T	T	.
Template Known Secondary structure									G	G	G		S	S								S					S		.	.	.	.		T						T	T							T	T	.	.			T	T	T	.	.	.	.											T	T									.
Template Predicted Secondary structure																													.	.	.	.																		.	.						.	.	.	.																					.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																							.	.	.																								.
Query SS confidence																																																							.	.	.																								.
Query Sequence		L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	.	.	.	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	.
Query Conservation																																																							.	.	.																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.															.	.	.																	.	.						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																																		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	P	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	.	.	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	N	K	P	V	A	.	.	V	G	F	G	I	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S														S					.	.			S	S			B		T	T	S		B		T														S	S				.	.			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																																		.	.
Template SS confidence
																		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	A	F	S	Q	A	L	K	N	Y	L	T	E	H	P	E	A	T	D	P	R	D	Y	L	Q	S	A	K	S	A	M	R	D	V	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		K	P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	.	.	.	.	.	.	.	.	A	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y	A	R	G	M	K	N	A	L
Template Known Secondary structure		S										T	T		S							.	.	.	.	.	.	.	.								S	S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.									.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions