Job Description P0C8J6 Confidence 98.46% Date Thu Jan 5 11:30:05 GMT 2012 Rank 16 Aligned Residues 180 % Identity 19% Template d1ps9a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.20

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	H	H	R	T	I	T	E	A	V	H	Q	E	G	G	K	I	A	L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T											G	G	G	S	B	S	T	T				S	S	S				T	T		S	S																						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	.	.	.	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F	I	I	I	Y	R	L	S	M	L	D	L	V	E
Template Known Secondary structure		.	.	.	.	.						T	T		S								B	T	S								T	T	T					S	T	T	S	S	S																					S	S	S												S	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																								.	.	.																									.	.	.	.	.
Query SS confidence																								.	.	.																									.	.	.	.	.
Query Sequence		D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	.	.	.	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	.	.	.	.	.	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S
Query Conservation																								.	.	.																									.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.										.	.	.																									.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	G	.	.	.	.	.	.	.	.	.	.	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	I	N	D	P
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.																T		S								B	T	T		S	S		S	S	S	T	T	S		T	T	T	T								T	T	S		S	S						S	S			S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.											.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		215	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	K	D	I	Q	Q	T	I	K	L	G	.	I	C	K	I	N	V	A	T	E	L
Query Conservation													.
Alig confidence		.											.
Template Conservation		.
Template Sequence		.	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F
Template Known Secondary structure		.									T	T	S		S					S	T
Template Predicted Secondary structure		.
Template SS confidence
			293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions