Return to main results Retrieve Phyre Job Id

Job DescriptionP0C8J6
Confidence96.04%DateThu Jan 5 11:30:05 GMT 2012
Rank102Aligned Residues111
% Identity14%Templated1p4ca_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  TNPAQAREFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATE
Query Conservation 
 



  

  



 






 

 
   
 

   
  
     









   
    

  

 



 
 
Alig confidence 










.






















..






















.


















Template Conservation      

  
  .



 
 






 

    
 ..  
 

     
 

 




 
. 

 









 


 
Template Sequence  LSAEDADRCIA. EGADGVILSNHGGRQLDCAISPM. . EVLAQSVAKTGKPVLIDSGFRRG. SDIVKALALGAEAVLLGRA
Template Known Secondary structure 

.TT
S

GGGTS
TT


GG..GT
S

SS

S.TT
S
S
Template Predicted Secondary structure 

.
















..








.



Template SS confidence 















































































   234.....240.... .....250.........260....... ..270.........280.........290 .........300.........
 
   235....240.........250.........260.........270.........280..
Predicted Secondary structure 









Query SS confidence 















































Query Sequence  LKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIADCGCEG
Query Conservation 
  
                
             
 
   
  


 
Alig confidence 














.............



















Template Conservation   
 


  
  

  ............. 
  
  

   
 
 
   
Template Sequence  TLYGLAARGETGVDE. . . . . . . . . . . . . VLTLLKADIDRTLAQIGCPD
Template Known Secondary structure  .............T

B
Template Predicted Secondary structure 

.............



Template SS confidence 















































   310.........320.... .....330.........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions