Job Description P0C8J6 Confidence 97.02% Date Thu Jan 5 11:30:05 GMT 2012 Rank 71 Aligned Residues 192 % Identity 14% Template d1geqa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.																	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.
Predicted Secondary structure																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	.	I	A	G	T	P	G	T	F	T	H	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	.	.	.	.	.	D	H	H
Query Conservation																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence																.						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																.
Template Sequence		D	K	Q	S	T	L	N	F	L	L	A	L	D	E	.	Y	A	G	A	I	E	L	G	I	P	F	S	D	P	I	A	D	G	K	T	I	Q	E	S	H	Y	R	A	L	K	N	G	F	K	L	R	E	A	F	W	I	V	K	E	F	R	R	H	S	S	T	P	I	V	L	M	T	Y	Y	N	P	I	Y	R	A
Template Known Secondary structure														G	G	.	G	B	S									S			T	T	S														T	T															T	T
Template Predicted Secondary structure																.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A
Query Conservation
Alig confidence																				.	.									.	.	.	.																.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.									.	.	.	.																.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	R	N	F	L	A	E	A	K	A	S	G	V	D	G	I	L	.	.	V	V	D	L	P	V	F	H	.	.	.	.	A	K	E	F	T	E	I	A	R	E	E	G	I	K	T	.	.	.	V	F	L	A	A	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	D	E	R	L	K	V	I	D
Template Known Secondary structure														T						.	.		T	T			G	G	G	.	.	.	.												T				.	.	.						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.									.	.	.	.																.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.														.	.	.	.	.	.	150	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	A	F	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																																.																									.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																																.
Template Sequence		D	M	T	T	G	F	V	Y	L	V	S	L	.	.	.	.	.	.	.	Y	E	I	P	K	T	A	Y	D	L	L	R	R	A	K	R	I	C	R	N	K	V	A	V	G	F	G	V	S	K	R	.	E	H	V	V	S	L	L	K	E	G	A	N	G	V	V	V	G	S	A	L	V	K	I	I	G	E	K	G	R
Template Known Secondary structure					S	S								.	.	.	.	.	.	.																			S	S						S				S		.									T	T		S																G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.																																.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
				240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	Q	A	L	K	N	Y	L	T	E
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		E	A	T	E	F	L	K	K	K	V	E	E
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions