Job Description P0C8J6 Confidence 58.72% Date Thu Jan 5 11:30:05 GMT 2012 Rank 373 Aligned Residues 169 % Identity 18% Template d1d3ga_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130
Predicted Secondary structure																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Query Sequence		S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	.	.	.	.	.	.	.	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	.	.	.	.	.	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	.	.	.	.	D	V	S
Query Conservation																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		Q	A	K	L	T	E	D	G	L	P	L	G	V	N	L	G	K	N	K	T	S	V	D	A	A	E	D	Y	A	E	G	V	R	V	L	G	P	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A
Template Known Secondary structure								T	T											T	T		S														G	G	G		S						S			T	T	S	T	T																			T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	.	.	F	S	R	L	E
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	K	I	A	P	D	L	T	S	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R
Template Known Secondary structure								S							.	.	.	.	.	.	.	.	.	.	.	.	.												T										B	S				T	T				T	T	T	T	S	S	S					G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.														.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		196	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		N	I	R	Q	W	V	.	.	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	A	F	S	Q	A	L	K	N	Y	L	T	E
Query Conservation								.	.
Alig confidence								.	.														.
Template Conservation																							.
Template Sequence		E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	.	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	K	R	E
Template Known Secondary structure							T	T	T		S						S	S			S		.										T		S					S								T
Template Predicted Secondary structure																							.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions