Job Description P0C8J6 Confidence 55.11% Date Thu Jan 5 11:30:05 GMT 2012 Rank 395 Aligned Residues 203 % Identity 13% Template c3ru6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168 Resolution 1.80 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		V	P	A	F	N	I	H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T	K	F	D	.	.	.	.	D	I	A	Q	K	V	R
Query Conservation																																																																							.	.	.	.
Alig confidence																							.	.																					.	.	.	.																							.	.	.	.
Template Conservation																							.	.																					.	.	.	.
Template Sequence		C	V	A	L	D	L	S	T	K	E	E	C	L	Q	L	A	K	E	L	K	N	.	.	L	D	I	W	L	K	V	G	L	R	A	Y	L	R	D	G	F	K	F	I	.	.	.	.	E	E	L	K	K	V	D	D	F	K	I	F	L	D	L	K	F	H	D	I	P	N	T	M	A	D	A	C	E	E	V	S	K
Template Known Secondary structure								S	S											T	T	T	.	.	S	S																			.	.	.	.																			S														T
Template Predicted Secondary structure																							.	.																					.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	.	.	.	E	F	A	E	A	T	G	I	D	S	L
Query Conservation																																																																				.	.	.
Alig confidence															.	.	.	.	.																				.																													.	.	.
Template Conservation															.	.	.	.	.																				.
Template Sequence		L	G	V	D	M	I	N	I	H	A	S	A	G	.	.	.	.	.	K	I	A	I	Q	E	V	M	T	R	L	S	K	F	S	K	R	P	L	.	V	L	A	V	S	A	L	T	S	F	D	E	E	N	F	F	S	I	Y	R	Q	K	I	E	E	A	V	I	N	F	S	K	I	S	Y	E	N	G	L	D	G	M
Template Known Secondary structure		T	T		S						G	G	G		.	.	.	.	.												T	T	S	S	S				.						S		T	T											S	S																T	T
Template Predicted Secondary structure															.	.	.	.	.																				.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																																						.	.
Query SS confidence																															.																																						.	.
Query Sequence		A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	.	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	A	.	.	F	S	Q	A	L	K	N	Y	L	T	E
Query Conservation																															.																																						.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																						.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	C	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	S	K	K	I	K	E	H	T	S	S	N	F	L	T	L	T	P	G	I	R	P	F	G	A	N	L	A	M	A	R	E	N	L	S	D	Y	I	V	V	G	R	P	I	Y	K	N	E	N	P	R	A	V	C	E	K	I	L	N	K
Template Known Secondary structure					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								S		T	T	S						S			T	T										T	T		S										T	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.																.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions