Job Description P0C8J6 Confidence 74.58% Date Thu Jan 5 11:30:05 GMT 2012 Rank 315 Aligned Residues 127 % Identity 17% Template c3q45E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val Resolution 3.00 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A
Query Conservation
Alig confidence																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		A	A	D	A	V	Q	I	K	K	N	G	F	E	I	I	K	V	K	V	G	G	.	S	K	E	L	D	V	E	R	I	R	M	I	R	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	S	I	T	L	R	I	D	A	N	Q	G	W	.	.	S	V	E	T	A	I	E	T	L	T	L
Template Known Secondary structure											T	T		S								S	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S							T	T		B	.	.
Template Predicted Secondary structure																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.								.	.	.
Predicted Secondary structure																			.	.	.																																											.								.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																											.								.	.	.	.	.	.	.
Query Sequence		T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	.	.	.	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	.	I	C	K	I	N	V	A	.	.	.	.	.	.	.	T	E	L
Query Conservation																			.	.	.																																											.								.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.						.	.	.																									.																		.								.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		L	E	.	.	.	.	.	.	.	.	.	.	P	Y	N	I	Q	H	C	E	E	P	V	S	R	N	L	Y	T	A	L	P	K	I	R	Q	A	C	R	I	P	I	M	A	.	D	E	S	C	C	N	S	F	D	A	E	R	L	I	Q	I	Q	A	C	D	S	F	N	L	K	L	S	K	S	A	G	I	T	N	A
Template Known Secondary structure			G	.	.	.	.	.	.	.	.	.	.	G	G			S						B		G	G	G	G	G	G									S	S					.	S	T	T			S										T	T			S						T	T	T	T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		207	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		236	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	A	F	S	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	I	I	R	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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