Job Description P0C8J6 Confidence 87.87% Date Thu Jan 5 11:30:05 GMT 2012 Rank 229 Aligned Residues 178 % Identity 16% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																	.																						.	.	.														.	.	.	.	.																						.
Query SS confidence																	.																						.	.	.														.	.	.	.	.																						.
Query Sequence		G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	.	Y	H	H	P	L	A	I	H	L	D	H	H	T	K	F	D	D	I	A	Q	K	.	.	.	V	R	S	G	V	R	S	V	M	I	D	A	S	.	.	.	.	.	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	.
Query Conservation																	.																						.	.	.														.	.	.	.	.																						.
Alig confidence																	.																						.	.	.														.	.	.	.	.																						.
Template Conservation
Template Sequence		G	I	N	Y	Y	L	D	Y	V	T	E	L	Q	K	Q	P	D	S	K	N	H	F	L	S	L	V	G	M	S	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	V	P	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E	V	F	T	Y	F
Template Known Secondary structure																S	T	T											S	S										T	T	T	S	S			S							S				S					G	G	G													T	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																	.	.	.	180	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	A	H	G	M	Y	A	S	A	P	.	.	A	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		T	K	P	L	G	I	K	L	P	P	Y	F	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	F	D	Q	A	A	A	I	F	N	.	Y	P	L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T
Template Known Secondary structure			S													.	.	.	.	.	.	.	.	.	.	.	.	.												.				S																T	T						G	G	G							G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.														.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	A	F	S	Q	A	L	K	N	Y	L	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	N	V	H	A	F	Y	K	R	L	N	P	S	I	Q	I	I	G	T	G	G	V	T	G	R	D	A	F	E	H	I	L	C	G	A	S	M	V	Q	I	G	T	A	L	H	Q	E	G	P	Q	I	F	K	R	I	T	K	E
Template Known Secondary structure											T	T	S		T	T	S						S														T		S					S								T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions