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Job DescriptionP0C8J6
Confidence95.12%DateThu Jan 5 11:30:05 GMT 2012
Rank134Aligned Residues220
% Identity16%Templatec3navB_
PDB info PDB header:lyaseChain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TKQMLNNAQ. RGGYAVPAFN. . . IHNLETMQVVVETAANLHAPVI. IAGT. . . . . . . . . . . . . . . . PGTFTHAGTENLLA
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Template Sequence  YQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFE
Template Known Secondary structure  TB
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Query Sequence  LVSAMAKQ. YHHPLAIHLD. . . . . HHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQL
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Template Sequence  LIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI. . ADVPTNES. . . . QPFVAAAEKFGIQP. . . IFIA
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Query Sequence  GGQEDDVQVNEADALYTNPAQAREFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI
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Template Sequence  P. . . . . . . . . . . . . . PTASDETLRAVAQLGKGYTYLLSRA. . PVH. . . . . . . . ALLERLQQFDAPPALLGFGISEP. AQV
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Query Sequence  QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRD
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Template Sequence  KQAIEAGAAGAISGS. . . . . . . . AVVKIIETHLDN. . PAKQLTELANFTQA
Template Known Secondary structure  TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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