Job Description P0C8J6 Confidence 49.67% Date Thu Jan 5 11:30:05 GMT 2012 Rank 415 Aligned Residues 86 % Identity 17% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		7	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		K	Q	M	L	N	N	A	Q	R	G	G	Y	.	A	V	P	A	F	N	I	H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T
Query Conservation														.
Alig confidence														.																							.															.	.	.	.	.	.	.	.																						.
Template Conservation																																					.															.	.	.	.	.	.	.	.																						.
Template Sequence		G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I	Q	R	L	F	M	I	D	S	S	A	Y	N	K	G	V	A	L	I	Q	K	.	V	Q	P	D	C	I	E	L	L	P	G	I	I	P	.	.	.	.	.	.	.	.	E	Q	V	Q	K	M	T	Q	K	L	H	I	P	V	I	A	G	G	L	I	E	.
Template Known Secondary structure											T	T											S														.				S							T	T			.	.	.	.	.	.	.	.																		S	S			.
Template Predicted Secondary structure																																					.															.	.	.	.	.	.	.	.																						.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	E	Q	V	N	Q	V	I	A	S	G	A	I	A	V	T
Template Known Secondary structure		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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