Job Description P0C8J6 Confidence 88.62% Date Thu Jan 5 11:30:05 GMT 2012 Rank 218 Aligned Residues 183 % Identity 14% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		V	S	T	K	Q	M	L	N	N	A	Q	R	G	G	Y	A	V	P	A	F	N	I	H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	.	.	.	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H
Query Conservation																																																											.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																		.																	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.																		.
Template Sequence		V	A	G	S	R	K	F	L	R	L	V	N	E	K	.	.	.	.	.	.	.	.	.	K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	.	L	V	I	D	V	N	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D
Template Known Secondary structure		T	T	T										T	T	.	.	.	.	.	.	.	.	.															T	T		.	S									T	T	S															T						T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.										.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	.	.	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A
Query Conservation																	.	.
Alig confidence		.	.	.													.	.			.																			.	.	.															.	.	.	.
Template Conservation		.	.	.																	.																			.	.	.															.	.	.	.
Template Sequence		.	.	.	S	S	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	.	K	S	I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	.	.	.	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	.	.	.	.	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R
Template Known Secondary structure		.	.	.		S													S	S	.									S	T	T								.	.	.									T						.	.	.	.		S			T	T					S
Template Predicted Secondary structure		.	.	.																	.																			.	.	.															.	.	.	.
Template SS confidence
					432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.				.	.	.	.	470	.	.	.	.	.	.	.	.	.					480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		159	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																																	.
Query SS confidence													.	.	.	.	.	.	.																																	.
Query Sequence		Q	A	R	E	F	A	E	A	T	G	I	.	.	.	.	.	.	.	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	.	N	L	P	L	V	L
Query Conservation													.	.	.	.	.	.	.																																	.
Alig confidence													.	.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G
Template Known Secondary structure										T				G	G	G											S	S	S		G	G	G	T	T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions