Return to main results Retrieve Phyre Job Id

Job DescriptionP0C8J6
Confidence95.67%DateThu Jan 5 11:30:05 GMT 2012
Rank115Aligned Residues124
% Identity15%Templatec3g0sA_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100....... ..110.........120.........130.........140.........150.....
Predicted Secondary structure 












.....





















Query SS confidence 


























. . . . .















































Query Sequence  LDHHTKFDDIAQKVRSGVRSVMIDASH. . . . . LPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYT
Query Conservation 


    
 
  

  









 .....

 



  
 


  

  

 





 
 
 
            
Alig confidence 


























.....


















.









.................
Template Conservation 

       
      

 

   




   

 


  
          .   

 

  ................. 
Template Sequence  VSRSCLKKLIDYHVANGTSAIVSVGTTGESATLSHDEHGDVVMMTLELADG. RIPVIAGTGA. . . . . . . . . . . . . . . . . N
Template Known Secondary structure  B
TT

SSTTTTGGGS
TT.SS



.................S
Template Predicted Secondary structure 















.




.................
Template SS confidence 















































































   1920.........30.........40.........50.........60......... 70......... 80
 
   156...160..... ....170.........180.........190.........200........ .210.........220.....
Predicted Secondary structure 
...





















.....







Query SS confidence 









. . .










































. . . . .
















Query Sequence  NPAQAREFAE. . . ATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLH. . . . . GASGLSTKDIQQTIKLG
Query Conservation   



  

 ... 



 






 

 
   
 

   
  
     





.....



   
    

  
Alig confidence 









...











...



























.....
















Template Conservation 
    
  
  
   


 
 
  
... 
   
   
      

     

 


 
   
   
      
    
Template Sequence  ATAEAISLTQRFNDSGIVGCLTVTP. . . YYNRPTQEGLFQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVGRLAEIK
Template Known Secondary structure  STTTTSS



...
SS


T
SS

S



TST
Template Predicted Secondary structure 







...






















Template SS confidence 













































































   81........90.........100..... ....110.........120.........130.........140.........150.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions