Job Description P0C8J6 Confidence 61.55% Date Thu Jan 5 11:30:05 GMT 2012 Rank 361 Aligned Residues 132 % Identity 14% Template c3fv9D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	.
Query Conservation																																																																																	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.																.	.											.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		R	A	K	V	A	R	H	R	A	Q	G	F	K	G	H	S	I	K	I	G	A	S	E	A	E	G	G	P	A	L	D	A	E	R	I	T	A	C	L	A	D	.	.	.	.	.	.	.	.	.	.	.	R	Q	P	G	E	W	Y	L	A	D	A	N	N	G	L	.	.	T	V	E	H	A	L	R	M	L	S	L
Template Known Secondary structure												T												T	T	T	T														T	T	.	.	.	.	.	.	.	.	.	.	.			T	T								T	T			.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.												.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.
				166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.																																																													.
Query SS confidence		.	.																																																													.
Query Sequence		.	.	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	.	I	C	K	I	N	V	A	T	E	L	K	N	A	F	S	Q	A
Query Conservation		.	.																																																													.
Alig confidence		.	.								.	.	.	.	.	.	.	.	.	.	.	.																								.																		.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		L	P	P	G	L	D	I	V	L	.	.	.	.	.	.	.	.	.	.	.	.	E	A	P	C	A	S	W	A	E	T	K	S	L	R	A	R	C	A	L	P	L	L	L	.	D	E	L	I	Q	T	E	T	D	L	I	A	A	I	R	D	D	L	C	D	G	V	G	L	K	V	S	K	Q	G	G	I	T	P	M
Template Known Secondary structure		S		S	S						.	.	.	.	.	.	.	.	.	.	.	.					S	S									T	T			S					.	S	T	T			S										T	T			S										T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		215	.	.	.	.	220	.	.	.													.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		243	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		282	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions