Job Description P0C8J6 Confidence 94.32% Date Thu Jan 5 11:30:05 GMT 2012 Rank 155 Aligned Residues 194 % Identity 16% Template c3fokH_ PDB info PDB header:structural genomics, unknown function Chain: H: PDB Molecule:uncharacterized protein cgl0159; PDBTitle: crystal structure of cgl0159 from corynebacterium2 glutamicum (brevibacterium flavum). northeast structural3 genomics target cgr115 Resolution 2.50 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	.	.	.	.	.	.	.	.	.	.	.	H	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		Y	E	L	L	E	R	X	A	I	A	L	S	R	P	G	V	D	G	V	L	G	T	.	.	.	.	.	.	.	.	.	P	D	I	I	D	D	L	A	A	L	G	L	L	D	D	K	I	V	V	G	S	X	N	R	G	G	L	R	G	A	S	F	E	X	D	D	R	Y	T	G	Y	N	V	S	S	X	V	D	R
Template Known Secondary structure														S	T	T								.	.	.	.	.	.	.	.	.										T	T			T	T											S		T	T		T	T	T	T	S					S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		97	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																		.	.	.																										.	.	.
Query SS confidence							.	.	.	.																																		.	.	.																										.	.	.
Query Sequence		G	V	R	S	V	.	.	.	.	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	.	.	.	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	.	.	.	A	R	E	F	A	E	A
Query Conservation							.	.	.	.																																		.	.	.																										.	.	.
Alig confidence							.	.	.	.																																		.	.	.										.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		G	V	D	F	A	K	T	L	V	R	I	N	L	S	D	A	G	T	A	P	T	L	E	A	T	A	H	A	V	N	E	A	A	A	A	Q	L	P	I	X	L	E	P	F	X	S	N	W	V	N	G	K	V	V	.	.	.	.	.	.	.	.	.	N	D	L	S	T	D	A	V	I	Q	S	V	A	I	A	A	G
Template Known Secondary structure		T												T	T		T	T																		T	T														T	T				.	.	.	.	.	.	.	.	.				S													T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																											.																												.	.	.	.																				.	.	.	.
Query SS confidence																											.																												.	.	.	.																				.	.	.	.
Query Sequence		T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	.	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	.	.	.	.	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	.	.	.	.
Query Conservation																											.																												.	.	.	.																				.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.											.																												.	.	.	.																				.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	N	D	.	.	.	.	.	.	.	.	.	.	.	S	S	Y	T	W	X	K	L	P	V	V	E	E	X	E	R	V	X	E	S	T	T	X	P	T	L	L	L	G	G	E	G	G	P	D	A	T	F	A	S	W	E	H	A	L	T	L	P	G	V	R	G	L	T	V	G	R	T	L	L	Y	P	Q	D	G
Template Known Secondary structure			S	S		.	.	.	.	.	.	.	.	.	.	.		S	S									T	T					G	G	G		S	S								S														T	T	S	T	T								T	T	T	S	S		S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.												.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
					238	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	F	S	Q	A	L	K	N	Y	L	T	E	H
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		D	V	A	A	A	V	D	T	A	A	R	L	V	H	T	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions