Return to main results Retrieve Phyre Job Id

Job DescriptionP0C8J6
Confidence96.51%DateThu Jan 5 11:30:05 GMT 2012
Rank84Aligned Residues200
% Identity16%Templatec3f4wA_
PDB info PDB header:synthase, lyaseChain: A: PDB Molecule:putative hexulose 6 phosphate synthase; PDBTitle: the 1.65a crystal structure of 3-hexulose-6-phosphate2 synthase from salmonella typhimurium
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.... .....80......... 90.......
Predicted Secondary structure 












.







.

Query SS confidence 






















































.














.







Query Sequence  VPAFNIHNLETMQVVVETAANLHAPVIIAGTPGTFTHAGTENLLALVSAMAKQYH. HPLAIHLDHHTKFDD. IAQKVRSG
Query Conservation 
 


  
 
   


 


   





         
           
  
 .


 




    
 .
  

  
Alig confidence 




















..
















....










.














.







Template Conservation   



       
 
      .. 

 
 

       
 ....  
  
        
  
 
  
            
Template Sequence  QLALDELTLPEAMVFMDKVVD. . DVDIIEVGTPFLIREGV. . . . NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAG
Template Known Secondary structure 
S

GG..G
S
TT....
TTS
S
TT
Template Predicted Secondary structure 





..






....








Template SS confidence 















































































   4.....10.........20.... .....30.........40. ........50.........60.........70.......
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  VRSVMIDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYTNPAQAREFAEATGIDSLAVAIG
Query Conservation 








 

 



  
 


  

  

 





 
 
 
            
 



  

  



 





Alig confidence 










.....
























................






















Template Conservation 

 
 
     .....              
    
     ................                       
Template Sequence  ADYVTVLGVTD. . . . . VLTIQSCIRAAKEAGKQVVVDMICV. . . . . . . . . . . . . . . . DDLPARVRLLEEAGADMLAVHTG
Template Known Secondary structure 
STTS
.....T

TT
................SST



Template Predicted Secondary structure 






.....





................






Template SS confidence 















































































   78.80........ .90.........100.........110... ......120.........130......
 
   178.180.........190.........200.........210.........220.........230...... ...240.........250
Predicted Secondary structure 


























.....
Query SS confidence 


























































. . . . .













Query Sequence  TAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATELK. . . . . NAFSQALKNYLTEH
Query Conservation 
 

 
   
 

   
  
     









   
    

  

 



 
 
 ..... 
            
Alig confidence 
..




























..
























.....













Template Conservation   ..            
           
 
 
..

           


 






  
 

   
      
   
Template Sequence  T. . DQQAAGRKPIDDLITMLKVRRKARIAVAG. . GISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQH
Template Known Secondary structure  ..TT

S
SS
S..S

TTTTT

S
T
SS
Template Predicted Secondary structure 
..















..













Template SS confidence 













































































   137 ..140.........150.........160...... ...170.........180.........190.........200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions