Job Description P0C8J6 Confidence 90.65% Date Thu Jan 5 11:30:05 GMT 2012 Rank 200 Aligned Residues 146 % Identity 14% Template c3dz1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution Resolution 1.87 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	.	.	.	.	.	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.																			.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	D	V	S	I	D	R	L	T	D	F	Y	A	E	V	G	C	E	G	V	T	V	L	G	I	L	G	E	A	P	K	L	D	A	A	E	A	E	A	V	A	T	R	F	I	K	R	A	K	.	.	S	X	Q	V	I	V	G	V	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P
Template Known Secondary structure		B															T	T		S					S	T	G	G	G	T	G	G	G	S																	T	.	.	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																				.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.																		.
		156	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure												.	.	.																																					.	.								.	.	.	.	.																	.
Query SS confidence												.	.	.																																					.	.								.	.	.	.	.																	.
Query Sequence		N	P	A	Q	A	R	E	F	A	E	.	.	.	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	.	.	N	L	P	L	V	L	H	.	.	.	.	.	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	.
Query Conservation												.	.	.																																					.	.								.	.	.	.	.																	.
Alig confidence												.	.	.												.	.	.	.																						.	.								.	.	.	.	.																	.
Template Conservation																										.	.	.	.
Template Sequence		G	F	A	A	X	R	R	L	A	R	L	S	X	D	A	G	A	A	G	V	X	I	A	P	.	.	.	.	P	P	S	L	R	T	D	E	Q	I	T	T	Y	F	R	Q	A	T	E	A	I	G	D	D	V	P	W	V	L	Q	D	Y	P	L	T	L	S	V	V	X	T	P	K	V	I	R	Q	I	V	X	D	S
Template Known Secondary structure		S															T		S							.	.	.	.		T	T			S																	T	T	S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
			225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	I	C	K	I	N	V	A	T	E	L	K	N	A	F	S	Q	A	L	K	N	Y	L	T	E
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	S	C	V	X	L	K	H	E	D	W	P	G	L	E	K	I	T	T	L	R	G	F	Q	K	D
Template Known Secondary structure		S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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