Job Description P0C8J6 Confidence 56.45% Date Thu Jan 5 11:30:05 GMT 2012
Rank 387 Aligned Residues 112
% Identity 13% Template c3chvA_
PDB info
PDB header: metal binding proteinChain: A: PDB Molecule: prokaryotic domain of unknown function (duf849) with a tim
PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution
Resolution 1.45 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
20 . . . . . . . . . 30 . . . . . . . . . 40
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. 60 . . . . . . . . . 70 . . .
. . . . . . 80 . . . . . . . . . 90 . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
V P A F N I H N L E T M Q V V V E T A A N .
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L H A P V I I A G T P G T F T H A G .
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T E N L L A L V S A M A K Q Y .
H H P L A I H L D H H T K F D D I A Q K V
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                                                                               
Template Sequence  
T P E I E A F D L S H I L R A I D X H G R G L L Y G K L Y V Q F V X G V K N A X P A D R E V F D F Y V R X X R T R A P Q A E W C A A G I G A N Q L T V N E W A I
Template Known Secondary structure  
S S T T S S S T T S T T S T T
Template Predicted Secondary structure  
Template SS confidence  
   
143 . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . .
 
   
95 . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
R S G .
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V R S V M I D A S H L P F A Q N I S R V K E V V D F C H R F D V S V
Query Conservation  
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Alig confidence  
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Template Conservation  
                                       
Template Sequence  
A A G G H T R T G L E D N I R L D R Q T L A P S N A A L V R R S V E L C D K Y Q R P V
Template Known Secondary structure  
T T S T T T B S S S S B T T B
Template Predicted Secondary structure  
Template SS confidence  
   
223 . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]