Job Description P0C8J6 Confidence 48.04% Date Thu Jan 5 11:30:05 GMT 2012 Rank 423 Aligned Residues 103 % Identity 14% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																																				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	Q	M	L	N	N	A	Q	R	G	G	Y	A	V	P	A	F	N	I	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	S	R	H	Q	L	L	D	K	Y	G	L	K	C	W	A	I	S	N	H	L	V	G	Q	A	V	C	D	A	I	I	D	E	R	H	E	A	I	L	P	A	R	I	W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T
Template Known Secondary structure												T	T		B		S														S	S		S							S						T	T																									T
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		51	.																		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.																.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.																.
Query Sequence		P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	.	.	.	.	.	.	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	.	S	G	V	R	S	V	M	I	D	A	S
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.																.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.																.
Template Conservation
Template Sequence		G	S	A	I	W	H	L	V	A	X	F	P	P	A	P	E	S	X	I	E	R	G	Y	Q	D	F	A	D	R	W	N	P	I	L	D	V	F	D	A	E	G	V	R	F	A	H	E	V	H	P	S	E	I	A	Y	D	Y	W	T	T	H	R	A	L	E	A	V	G	H	R	P	A	F	G	L	N	F	D	P	S
Template Known Secondary structure				S	S	G	G	G	T	T			S																													T									T	T	S	S			S											T	T	T		T	T							T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		107	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		212	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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