Job Description P0C8J6 Confidence 76.60% Date Thu Jan 5 11:30:05 GMT 2012 Rank 307 Aligned Residues 211 % Identity 11% Template c2v5jB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PDBTitle: apo class ii aldolase hpch Resolution 1.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	M	L	N	N	A	Q	R	G	G	Y	A	V	P	A	F	N	I	H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T	K
Query Conservation
Alig confidence																											.	.	.																					.	.													.														.
Template Conservation																											.	.	.																					.	.													.														.
Template Sequence		N	S	F	K	A	A	L	K	A	G	R	P	Q	I	G	L	W	L	G	L	S	S	S	Y	S	.	.	.	A	E	L	L	A	G	A	G	F	D	W	L	L	I	D	G	E	H	A	P	.	.	N	N	V	Q	T	V	L	T	Q	L	Q	A	.	I	A	P	Y	P	S	Q	P	V	V	R	P	S	.	W	N	D
Template Known Secondary structure										T	T										S						.	.	.						T	S			S						T	T	T	S	S	.	.													.		T	T	S	S	S							S	.	S	S
Template Predicted Secondary structure																											.	.	.																					.	.													.														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																														.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	F	D	V	S	V	E	A	E	L	G	Q
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		P	V	Q	I	K	Q	L	L	D	V	G	T	Q	T	L	L	V	.	.	.	.	.	P	M	V	Q	N	A	D	E	A	R	E	A	V	R	A	T	R	Y	P	P	A	G	I	R	G	V	G	S	A	L	A	R	A	S	R	W	N	R	I	P	D	Y	L	Q	K	A	N	D	Q	M	C	V	L	V	Q	I	E	T
Template Known Secondary structure											T	T							.	.	.	.	.	S				S											T	S		T	T	T					G	G	G	T	T	T	G	G	G	T	T	T	T	S	T	T																	S
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.								.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	.	.	.	.	.	.	.	N	L	P	L	V	L	H	G	A
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	L	P	Q	I	L	D	V	E	G	V	D	G	V	F	I	G	P	A	D	L	S	A	D	M	G	Y	A	G	N	P	Q	H	P	E	V	Q	A	A	I	E	Q	A	I	V	Q	I	R	E	S	G	K	A	P	G	I	L	I	A
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T						T	S	T	T															T	T	S	T	T				S																	T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.																	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	A	F	S	Q	A	L	K	N	Y	L	T	E
Query Conservation
Alig confidence			.	.	.																					.
Template Conservation			.	.	.																					.
Template Sequence		N	.	.	.	E	Q	L	A	K	R	Y	L	E	L	G	A	L	F	V	A	V	G	V	D	.	T	T	L	L	A	R	A	A	E	A	L	A	A	R
Template Known Secondary structure			.	.	.										T	T										.
Template Predicted Secondary structure			.	.	.																					.
Template SS confidence
		215				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions