Job Description P0C8J6 Confidence 76.90% Date Thu Jan 5 11:30:05 GMT 2012 Rank 305 Aligned Residues 115 % Identity 11% Template c2oo6A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400 Resolution 1.80 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	A	E	E	A	R	E	R	Q	F	R	A	I	K	T	N	I	F	I	H	D	D	G	P	L	H	A	W	R	P	G	F	A	V	P	F	Q	P	A	L	N	V	D	R	K	V	L	R	N	L	R	A	H	L	E	A	L	R	D	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	D
Template Known Secondary structure										T	T												S	S	S	S					B	G	G	G	T	B	S			T	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																.	210	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I
Query Conservation
Alig confidence													.	.																			.	.	.	.	.	.	.	.	.																										.
Template Conservation													.	.																			.	.	.	.	.	.	.	.	.																										.
Template Sequence		V	E	I	L	L	D	L	N	F	N	A	.	.	K	P	E	G	Y	L	K	I	L	R	E	L	A	D	F	D	L	F	.	.	.	.	.	.	.	.	.	W	V	E	I	D	S	Y	S	P	Q	G	L	A	Y	V	R	N	H	S	P	H	P	I	S	S	.	C	E	T	L	F	G	I	R	E	F	K	P	F	F
Template Known Secondary structure		S							T	T		S	.	.												T	T	T	S			S	.	.	.	.	.	.	.	.	.							S											T		S	S					.		T	T
Template Predicted Secondary structure													.	.																			.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240										.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	I	C	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	N	A	V	D	V
Template Known Secondary structure			T	T			S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions