Job Description P0C8J6 Confidence 97.05% Date Thu Jan 5 11:30:05 GMT 2012 Rank 69 Aligned Residues 190 % Identity 18% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	.	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D
Query Conservation																																			.
Alig confidence																																			.																							.	.	.
Template Conservation																																																										.	.	.
Template Sequence		I	E	V	A	D	K	I	R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	K	W	V	P	Q	M	A	G	S	A	E	V	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	.	.	.	A	P	N	L	K	G	F	E	A	A	L	E	S	G	V	K	E	V	A	V	F
Template Known Secondary structure																	T	T		S								S		T	T	T		G	G	G	T	T								S				T	T	S						.	.	.			S										T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		105	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Query Sequence		A	S	.	.	.	.	.	.	.	.	.	.	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	.	.	.	A	T	G	I	D	S
Query Conservation				.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	.	.	.	.	.	.	.	.	D	V	D	P	R	Q	V	A	W	V	A	R	E	L	Q	Q	M	G	C	Y	E
Template Known Secondary structure				S										S	S																			T	T										T	T		B	T	T	T	B	.	.	.	.	.	.	.	.																	T	T		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																.											.	.
Query SS confidence																																.											.	.
Query Sequence		L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	.	N	L	P	L	V	L	H	G	A	S	.	.	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N
Query Conservation																																.											.	.
Alig confidence		.	.										.	.																		.											.	.
Template Conservation		.	.										.	.
Template Sequence		.	.	V	S	L	G	D	T	I	G	V	.	.	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	R	E	R	L	A	G	H	F	H	D	T	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	E	G	I	A	V	F	D
Template Known Secondary structure		.	.						S	S	S		.	.														T	T	T	S		G	G	G						B		T	T	S												T	T
Template Predicted Secondary structure		.	.										.	.
Template SS confidence
				174	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions