Job Description P0C8J6 Confidence 96.45% Date Thu Jan 5 11:30:05 GMT 2012 Rank 86 Aligned Residues 202 % Identity 14% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A
Query Conservation
Alig confidence																																																											.	.
Template Conservation																																																											.	.
Template Sequence		V	P	T	A	D	K	I	A	L	I	N	R	L	S	D	C	G	Y	A	R	I	E	A	T	S	F	V	S	P	K	W	V	P	Q	L	A	D	S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y	S	V	L	V	.	.	P	N	X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I
Template Known Secondary structure															T	T	T	T		S								S		T	T	T		G	G	G	T	T								S				S	S	S							.	.	S	S										T	T		S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		106	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																																																								.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.																																																								.	.	.
Query Sequence		S	H	L	P	F	.	.	.	.	.	.	.	.	.	.	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	.	.	.	A	T	G	I	D	S	L
Query Conservation							.	.	.	.	.	.	.	.	.	.																																																								.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.													.	.	.						.	.
Template Conservation																																																				.	.	.	.	.	.	.	.																					.	.
Template Sequence		S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	.	.	.	.	.	.	.	.	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	G	C	H	.	.
Template Known Secondary structure			S									T	S	S																			T	T										S	S			T	T	T		.	.	.	.	.	.	.	.																		T		S	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																			.	.	.	230	.
Predicted Secondary structure																															.											.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.											.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	.	N	L	P	L	V	L	H	G	A	S	.	.	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	I	N	V
Query Conservation																															.											.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																		.											.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		E	V	S	L	G	D	T	I	G	R	.	.	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K	G	L	R	V	F	D	A	S	V	G	G	L	G	G	C	P	F	A	P	G	A	K	G	N	V
Template Known Secondary structure								T	T	S		.	.															T	T	S		G	G	G						B		T	T	S													T							B	T	T			S		B	T	T	B	T	T	S			B
Template Predicted Secondary structure												.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	E	L	K	N	A	F	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	V	A	V	V	E	X	L	H
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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