Job Description P0C8J6 Confidence 84.86% Date Thu Jan 5 11:30:05 GMT 2012 Rank 257 Aligned Residues 156 % Identity 14% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F	S	P	K	Q	I	R	A	R	F	P	H	L
Template Known Secondary structure										G	G	G		S							T	T	S															T	T			G	G	G					S							T	T	T								T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
									156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.								.												.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																.												.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		H	I	G	R	S	V	H	S	L	E	E	A	V	Q	.	A	E	K	E	D	A	D	Y	V	L	F	.	.	.	.	.	.	.	.	.	.	G	H	V	F	R	G	V	S	L	L	S	D	I	K	Q	R	I	S	I	P	V	I	A	I	G	G	.	.	M	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G
Template Known Secondary structure									S							.				T	T		S					.	.	.	.	.	.	.	.	.	.																			S						S	S	.	.			G	G	G							T	T		S
Template Predicted Secondary structure																.												.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	A	T	E	L	K	N	A	F	S	Q	A	L	K	N	Y	L	T	E	H	P	E	A	T	D	P	R	D	Y	L	Q	S	A	K	S	A	M	R	D	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	V	M	S	G	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E	M
Template Known Secondary structure					S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180																.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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