Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence90.96%DateThu Jan 5 11:23:07 GMT 2012
Rank376Aligned Residues187
% Identity18%Templated2hlca_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDG. . . . . . RVFEALLVGSDSLT. . . .
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Template Sequence  PYQAGLDITL. . . . . . . QDQRRVWCGGSLIDNK. WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDT
Template Known Secondary structure  TT.......TTS
TT.
TTS
SBTT

S
S
TT
BTTT
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   28.30....... ..40.........50... ......60.........70.........80.........90.........
 
   126...130... ......140.........150.........160.........170...... ...180.........
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Query Sequence  . . . DLAVLKIN. . . . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISAT. . . . . . . GRIGLNPTGRQNF
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Template Conservation                         
                                                        
Template Sequence  YLNDVALIKIPHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVEST
Template Known Secondary structure  TBT


S




SS



B


GGGGG


TT
SS

SS


B

TTS
TTSS
TT
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   190........ .200......... 210.........220.........230.........240.........250...
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Query Sequence  LQTDASINH. . . . GNSGGALVNSL. GELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGR
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Template Sequence  ICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGK. . . PVGFSRVTSYMDWIQQNTGIKF
Template Known Secondary structure 

TTS
B

TT
TT
GGGT

TT
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   181........190.........200.........210.........220.... .....230.........240......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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