Job Description P0AEE3 Confidence 97.31% Date Thu Jan 5 11:23:07 GMT 2012 Rank 316 Aligned Residues 177 % Identity 14% Template d2h6ma1 SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Resolution 1.40

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.																		.	.	.	.
Query SS confidence																																																									.	.	.	.																		.	.	.	.
Query Sequence		S	Y	N	L	A	V	R	R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	.	.	.	.	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	.	.	.	.
Query Conservation																																																									.	.	.	.																		.	.	.	.
Alig confidence																					.	.	.	.	.	.																			.												.	.	.	.																		.	.	.	.
Template Conservation																					.	.	.	.	.	.																			.
Template Sequence		S	T	L	E	I	A	G	L	V	R	K	N	L	V	Q	F	G	V	G	.	.	.	.	.	.	E	K	N	G	S	V	R	W	V	M	N	A	L	G	V	K	D	D	.	W	L	L	V	P	S	H	A	Y	K	F	E	K	D	Y	E	M	M	E	F	Y	F	N	R	G	G	T	Y	Y	S	I	S	A	G	N	V
Template Known Secondary structure																					.	.	.	.	.	.		T	T	S													B	T	.						G	G	G	T	T	T	S	T	T	G	G	G	S							T	T							G	G	G	S
Template Predicted Secondary structure																					.	.	.	.	.	.																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
				118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																		.	.	.	.																																																							.	.	.
Query SS confidence		.	.																		.	.	.	.																																																							.	.	.
Query Sequence		.	.	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	.	.	.	.	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	.	.	.
Query Conservation		.	.																		.	.	.	.																																																							.	.	.
Alig confidence		.	.																		.	.	.	.																																																							.	.	.
Template Conservation
Template Sequence		V	I	Q	S	L	D	V	G	F	Q	D	V	V	L	M	K	V	P	T	I	P	K	F	R	D	I	T	Q	H	F	I	K	K	G	D	V	P	R	A	L	N	R	L	A	T	L	V	T	T	V	N	G	T	P	M	L	I	S	E	G	P	L	K	M	E	E	K	A	T	Y	V	H	K	K	N	D	G	T	T	V
Template Known Secondary structure						S	S	S	S			S							T	T	S			B				G	G	G	B			G	G	G	G	G	G	G	T	T	S									T	T									S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
								189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																					.	.	.	.
Query SS confidence		.	.	.	.	.	.																					.	.	.	.
Query Sequence		.	.	.	.	.	.	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	.	.	.	.	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F
Query Conservation		.	.	.	.	.	.																					.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		D	L	T	V	D	Q	A	W	R	G	K	G	E	G	L	P	G	M	C	G	G	A	L	V	S	S	N	Q	S	I	Q	N	A	I	L	G	I	H	V	A	G	G	N	.	.	.	.	.	.	.	.	.	S	I	L	V	A	K	L	V
Template Known Secondary structure																	T	T		T	T						S		G	G	G	T	T											T	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions