Job Description P0AEE3 Confidence 98.33% Date Thu Jan 5 11:23:07 GMT 2012 Rank 266 Aligned Residues 156 % Identity 14% Template d2bhga1 SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Resolution 1.9

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.																	.	.	.	.	.																		.	.
Query SS confidence																																	.	.	.																	.	.	.	.	.																		.	.
Query Sequence		L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	.	.	.	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	.	.	.	.	.	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	.	.	I	N	A	R	R	V
Query Conservation																																	.	.	.																	.	.	.	.	.																		.	.
Alig confidence												.																					.	.	.																	.	.	.	.	.																		.	.
Template Conservation												.
Template Sequence		I	C	C	A	T	G	V	F	G	T	.	A	Y	L	V	P	R	H	L	F	A	E	K	Y	D	K	I	X	L	D	G	R	A	X	T	D	S	D	Y	R	V	F	E	F	E	I	K	V	K	G	Q	D	X	L	S	D	A	A	L	X	V	L	H	R	G	N	K	V	R	D	I	T	K	H	F	R	D	T	A	R
Template Known Secondary structure										B	T	.										T	S			S					T	T					G	G	G											S	S	S					S							S	S	S			B				G	G	G	B		S	S
Template Predicted Secondary structure												.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	.	.	.	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D
Query Conservation																																																												.	.	.
Alig confidence																													.	.	.																													.	.	.																	.	.	.
Template Conservation																													.	.	.																																																.	.	.
Template Sequence		X	K	K	G	T	P	V	V	G	V	V	N	N	A	D	V	G	R	L	I	F	S	G	E	A	L	T	.	.	.	Y	K	D	I	V	V	T	X	P	G	L	F	A	Y	K	A	A	T	R	A	G	Y	A	G	G	A	V	L	A	K	D	G	A	D	T	F	I	V	G	T	H	S	A	G	G	N	G	.	.	.
Template Known Secondary structure				T	T										T	T	T										S	S	.	.	.									T	T										T	T		T	T								T	T													T	T	.	.	.
Template Predicted Secondary structure																													.	.	.																																																.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I
Query Conservation
Alig confidence		.	.	.	.	.	.									.	.
Template Conservation		.	.	.	.	.	.									.	.
Template Sequence		.	.	.	.	.	.	V	G	Y	C	S	C	V	S	.	.	R	S	X	L	Q	K	X	K
Template Known Secondary structure		.	.	.	.	.	.									.	.
Template Predicted Secondary structure		.	.	.	.	.	.									.	.
Template SS confidence
								188	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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