Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence96.92%DateThu Jan 5 11:23:07 GMT 2012
Rank326Aligned Residues179
% Identity17%Templated1trna_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100...... ...110.........120....
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV. . . . . . . ALQDGRVFEALLVGSDSL. . . .
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Template Sequence  PYQVSLN. . . . . . . . . . . . SGYHFCGGSLINEQ. WVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHPQYDRK
Template Known Secondary structure  TT............SSSTT.
GGG

SS
S
SBSSS

S


TT

TT
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   28.30.... .....40........ .50.........60.........70.........80.........90....
 
   125....130... ......140.........150.........160..... ....170.........180.........190
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Query Sequence  . . . TDLAVLKIN. . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLG. . . . . . . QTITQGIISATGRIGLNPTGRQNFL
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Template Conservation            
                                                                     
Template Sequence  TLNNDIMLIKLSSRAVINARVSTISLPTAPPATGTKCLISGWGNTASSGADPDELQCLDAPVLSQAKCEASYPGKITSNM
Template Known Secondary structure  T
TT

SS



SSSS


B

SS


TT
S


SSSS



B

STTT

TT
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   191....... .200.........210.........220.........230.........240.........250..
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Query Sequence  QTDASINH. . . . . . GNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG
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Template Sequence  FCVGFLEGGKDSCQGDSGGPVV. CNGQLQGVVSWGDGCAQKNK. . . . PGVYTKVYNYVKWIKNTIAAN
Template Known Secondary structure  S
TT
SSB

TT
TT
.TT
SSSSBTTB....
GGGGT
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   181........190.........200.. .......210.........220.. .......230.........240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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