Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence96.83%DateThu Jan 5 11:23:07 GMT 2012
Rank329Aligned Residues166
% Identity16%Templated1os8a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Prokaryotic proteases
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GSGVIMDQRGYIITNKHVINDADQIIVAL. . . . . . . . . . QDGRVFEALLVGSDSL. . . . . TDLAVLKINATGGLPTIPIN
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Template Sequence  CGGALYAQD. IVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGYNGTGKDWALIKLAQPINQPTLKIA
Template Known Secondary structure  TT.
GGGSS
S



S
SBTT
TT

TT
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S



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   42.......50 .........60.........70.........80.........90.........100.........110.........120
 
   145....150.........160.........170...... ...180.........190.... .....200.........
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Query Sequence  ARRVPHIGDVVLAIGNPYNLGQTITQGIISAT. . . . . . . . . GRIGLNPTGRQNFLQTDA. . . . . . SINHGNSGGALVNSL
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Template Conservation                                                                        
 
       
Template Sequence  TTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSAYGNELVANEEICAGYPDTGGVDTCQGDSGGPMFRKD
Template Known Secondary structure 
SSTTSSSSS
SSTT



SB

GGGS
TTTS
TTT


B

TT
TT

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   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   210. ........220.........230.........240.........250
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Query Sequence  GE. . . . LMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIR
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Template Sequence  NADEWIQVGIVSWGYGCARPGY. . . . PGVYTEVSTFASAIASAAR
Template Known Secondary structure  TTS

SSSS
TT
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   204.....210.........220..... ....230.........240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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