Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence97.39%DateThu Jan 5 11:23:07 GMT 2012
Rank312Aligned Residues178
% Identity13%Templated1orfa_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.. .......120
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGR. . . . . . . . . . . . . . . VFEALLVG
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Template Sequence  PYMVLL. . . . . . . . . . . SLDRKTICAGALIAKD. WVLTAAHCNLNKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDP
Template Known Secondary structure  TT...........
SSS
TT.
TT



TT
S
SBSSS

TT


TT

T
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   28.30... ......40......... 50.........60.........70.........80.........90.....
 
   121........130... ......140.........150.........160.........170...... ...180.
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Query Sequence  SDSLTDLAVLKIN. . . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISAT. . . . . . . . . . . . . . GRIGL
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Template Conservation                                                                                  
Template Sequence  ATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFN
Template Known Secondary structure  TT
TT

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SS




TT
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SSSSS


SB

TSTTTTTTT
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   182.......190..... ....200.........210.........220.........230...... . ..240......
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Query Sequence  NPTGRQNFLQTDAS. . . . INHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAI. P. . FQLATKIMD
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Template Sequence  PVIGMNMVCAGSLRGGRDSCNGDSGSPLL. CEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK
Template Known Secondary structure  T


TT
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B

TT
TT
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TT
TT
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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