Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence97.62%DateThu Jan 5 11:23:07 GMT 2012
Rank301Aligned Residues182
% Identity12%Templated1nn6a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100...... ...110.........120.
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV. . . . . . . ALQDGRVFEALLVGS. . . . . . .
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Template Sequence  PYMAYLEIVT. . . . . . . SNGPSKFCGGFLIRRN. FVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTS
Template Known Secondary structure  TT
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TT.
GGG

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TT

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TT
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   28.30....... ..40.........50... ......60.........70.........80.........90.........
 
   122.......130... ......140.........150.........160..... ....170.........180.........
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Query Sequence  DSLTDLAVLKIN. . . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLG. . . . . . . QTITQGIISATGRIGLNPTGRQNF
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Template Sequence  TLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNL
Template Known Secondary structure  T
TT

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TT




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SB
B

GGGGTTSTT

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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   190........ .200.........210.........220.........230.........240.........250..
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Query Sequence  LQTDASINH. . . . GNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG
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Template Sequence  QLCVGNPRKTAFKGDSGGPLLC. AGVAQGIVSYGRSDAK. . . . . . PPAVFTRISHYRPWINQILQAN
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TTT





TT
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   180.........190.........200. ........210....... ..220.........230.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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