Job Description P0AEE3 Confidence 98.20% Date Thu Jan 5 11:23:07 GMT 2012 Rank 273 Aligned Residues 129 % Identity 22% Template d1mbma_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral proteases Resolution 2.00

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	.	.	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	D	L	A	V	L
Query Conservation																																							.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																										.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template Sequence		K	A	R	G	N	V	G	F	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	Y	G	T	G	S	V	W	T	R	N	N	E	V	V	V	L	T	A	S	H	V	V	G	R	A	N	M	A	T	L	K	I	G	D	A	M	L	T	.	.	.	.	L	T	F	K	K	N	G	D	F	A	E	A
Template Known Secondary structure					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S										T	T													T	T								T	T					.	.	.	.							T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.														.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G
Query Conservation
Alig confidence																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	T	Q	S	E	L	P	G	N	W	P	Q	L	H	F	A	Q	P	T	T	G	P	A	S	W	C	.	.	.	.	.	.	T	A	T	G	D	E	E	G	L	L	S	G	E	V	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	T	T	S	G	D	S	G	S	A	V	V	Q	G	D	A
Template Known Secondary structure					T	T	T	S		S				B			B					S							.	.	.	.	.	.		T	T									S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	T	T						T	T
Template Predicted Secondary structure																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	M	G	I	N	T	L	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	V	V	G	V	H	T	G	S
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions