Job Description P0AEE3 Confidence 99.92% Date Thu Jan 5 11:23:07 GMT 2012 Rank 25 Aligned Residues 184 % Identity 17% Template d1lvmb_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral proteases Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																					.										.	.	.	.
Query SS confidence																																																					.										.	.	.	.
Query Sequence		R	R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	.	Q	I	I	V	A	L	Q	D	G	.	.	.	.	R	V	F	E	A	L	L	V	G	S	D	S	L	T	D
Query Conservation																																																					.										.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																												.										.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	I	S	S	T	I	C	H	L	T	N	E	S	.	.	.	.	.	.	.	.	.	.	D	G	H	T	T	S	L	Y	G	I	G	F	G	P	F	I	I	T	N	K	H	L	F	R	R	N	N	G	T	L	L	V	Q	S	L	H	G	V	F	K	V	K	N	T	T	T	L	Q	Q	H	L	I	D	G	R	D
Template Known Secondary structure						T	T									.	.	.	.	.	.	.	.	.	.	T	T											T	T						G	G	G	G	S			S								T	T						S		G	G	G	S						T	T	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	.	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L
Query Conservation																																																										.
Alig confidence								.																															.	.	.	.	.															.
Template Conservation								.																															.	.	.	.	.
Template Sequence		M	I	I	I	R	M	.	P	K	D	F	P	P	F	P	Q	K	L	K	F	R	E	P	Q	R	E	E	R	I	C	L	V	T	T	N	F	Q	.	.	.	.	.	T	K	S	M	S	S	M	V	S	D	T	S	C	T	F	P	S	S	D	G	I	F	W	K	H	W	I	Q	T	K	D	G	Q	C	G	S	P	L
Template Known Secondary structure								.		T	T	S					S				B					T	T											S	.	.	.	.	.		G	G	G														T	T	T	T										T	T		T	T
Template Predicted Secondary structure								.																															.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		206	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	N	S	L	.	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D	G	R	V	I	R	G	Y
Query Conservation						.
Alig confidence						.																		.	.	.	.	.																.	.
Template Conservation																								.	.	.	.	.																.	.
Template Sequence		V	S	T	R	D	G	F	I	V	G	I	H	S	A	S	N	F	T	N	T	N	N	.	.	.	.	.	Y	F	T	S	V	P	K	N	F	M	E	L	L	T	N	.	.	Q	E	A	Q	Q	W	V	S	G	W
Template Known Secondary structure				T	T	T												T	T	S	S	S		.	.	.	.	.							T	T								.	.	G	G	G						S
Template Predicted Secondary structure																								.	.	.	.	.																.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions