Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence100.00%DateThu Jan 5 11:23:07 GMT 2012
Rank13Aligned Residues202
% Identity39%Templated1l1ja_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Prokaryotic proteases
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60..... ....70.........80.........90.........100......
Predicted Secondary structure 




.................



















Query SS confidence 





















. . . . . . . . . . . . . . . . .








































Query Sequence  PASYNLAVRRAAPAVVNVYNRG. . . . . . . . . . . . . . . . . LNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV
Query Conservation               


 
    .................              


 

   
 


  


       
Alig confidence 





















.................








































Template Conservation        
      


 
                                   



 
   
 


  


       
Template Sequence  ESPIVNVVEACAPAVVKIDVVKTTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNITV
Template Known Secondary structure  S
GGG







TTS
TTTTTSS
SS
Template Predicted Secondary structure 








































Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   107..110.........120.........130....... ..140.........150.........160.........170.........180.....
Predicted Secondary structure 













.




























Query SS confidence 






























.















































Query Sequence  ALQDGRVFEALLVGSDSLTDLAVLKINATGG. LPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTG
Query Conservation     

    
 
   
   






     .              
  
 


 
         
 

   
       
Alig confidence 






























.















































Template Conservation      
    
 
   
   




 
                                       
 
            
Template Sequence  TMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDG
Template Known Secondary structure 
TTS
B


TTTTB

SSS






GGG

TT

TTSSS

TTS
Template Predicted Secondary structure 







































Template SS confidence 















































































   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   186...190.........200.........210.........220.........230.........240.........
Predicted Secondary structure  ...
























Query SS confidence  . . .































































Query Sequence  . . . RQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLI
Query Conservation  ...    
  

 
  
 




 
  
 



                   


   
      
 
Alig confidence  ...








































....


















Template Conservation         
        
 




 
  
 



           ....
   


   
   
  
 
Template Sequence  SGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAV. . . . NLGFAIPINTVKKFLDTIL
Template Known Secondary structure  S
SS


TTTTTS
SSS


S


S

....S
GGG
Template Predicted Secondary structure 






















....

Template SS confidence 


































































   188.190.........200.........210.........220.........230. ........240.........250
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions