Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence99.58%DateThu Jan 5 11:23:07 GMT 2012
Rank54Aligned Residues161
% Identity19%Templated1hpga_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Prokaryotic proteases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80. ........ 90.........100.........110.........120.........130........ .140...
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Query Sequence  IRTLGS. GVIMDQRG. . YIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGL. . . . . . . . . PTIPI
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Template Sequence  GGSRCSAAFNVTKGGARYFVTAGHCTNISANWSASS. GGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGSTQDI
Template Known Secondary structure  TT

TT
TT
SSST.T


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   34.....40.........50.........60......... 70.........80.........90.........100.........110..
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  NARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKS
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Template Sequence  SSAANAVVGQAIKKSGSTTKVTSGTVTAVNVT. . . VNYGDGPVYNMVRTTACSAGGDSGGAHFA. GSVALGIHSGSSGCS
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TT
TTT...TT




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   125....130.........140.........150...... ...160.........170.........180..... ....190.........200
 
   224.....230.........240.....
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Query Sequence  NDGETPEGIGFAIPFQLATKIM
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Template Sequence  GTA. . . . GSAIHQPVTEALSAY
Template Known Secondary structure  TTB....


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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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