Job Description P0AEE3 Confidence 97.99% Date Thu Jan 5 11:23:07 GMT 2012 Rank 283 Aligned Residues 187 % Identity 13% Template d1gvkb_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Resolution 0.94

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.													.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	.	.	.	.	.	.	.	.	.	V	F	E	A	L	L	V	G	S	D	S	L	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.													.	.
Alig confidence												.	.	.	.	.	.	.																	.																								.	.	.	.	.	.	.	.	.													.	.
Template Conservation												.	.	.	.	.	.	.																	.
Template Sequence		P	S	Q	I	S	L	Q	Y	R	S	.	.	.	.	.	.	.	G	S	S	W	A	H	T	C	G	G	T	L	I	R	Q	N	.	W	V	M	T	A	A	H	C	V	D	R	E	L	T	F	R	V	V	V	G	E	H	N	L	N	Q	N	N	G	T	E	Q	Y	V	G	V	Q	K	I	V	V	H	P	Y	W	N
Template Known Secondary structure		T	T									.	.	.	.	.	.	.	T	T													T	T	.						G	G	G	G		S									S		S	B	T	T	S			S														T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.																	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
									125	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.															.
Predicted Secondary structure		.	.	.	.	.	.	.														.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.														.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	D	L	A	V	L	K	I	N	A	T	G	G	.	.	.	.	.	.	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation		.	.	.	.	.	.	.														.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.														.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	D	V	A	A	G	Y	D	I	A	L	L	R	L	A	Q	S	V	T	L	N	S	Y	V	Q	L	G	V	L	P	R	A	G	T	I	L	A	N	N	S	P	C	Y	I	T	G	W	G	L	T	R	T	N	G	Q	L	A	Q	T	L	Q	Q	A	Y	L	P	T	V	D	Y	A	I	C	S	S	S	S	Y	W
Template Known Secondary structure		T	T		G	G	G										S	S					B	T	T	B								T	T					T	T								S		B	S	S	T	T			B		S	B															T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	.	.	.	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D	G
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.																							.	.
Template Conservation																																																												.	.
Template Sequence		G	S	T	V	K	N	S	M	V	C	A	G	G	D	G	V	R	S	G	C	Q	G	D	S	G	G	P	L	H	C	L	V	N	G	Q	Y	A	V	H	G	V	T	S	F	V	S	R	L	G	C	N	V	T	R	K	P	T	V	.	.	F	T	R	V	S	A	Y	I	S	W	I	N	N	V	I	A	S	N
Template Known Secondary structure		G	G	G			T	T							S	S	S		B			T	T		T	T								T	T												B	T	T	B	S	S		T	T					.	.				G	G	G	S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions