Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence98.13%DateThu Jan 5 11:23:07 GMT 2012
Rank278Aligned Residues177
% Identity16%Templated1gdna_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution0.81

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.. .......120..
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGR. . . . . . . . . . . . . VFEALLVGSD
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Template Sequence  PFIVSI. . . . . . . . . . . SRNGGPWCGGSLLNAN. TVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSG
Template Known Secondary structure  TT...........TTTT.
TTS
GGGS
SBSSSSS
TT
BT
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   28.30... ......40......... 50.........60.........70.........80.........90.....
 
   123......130... ......140.........150.........160.........170...... ...180......
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Query Sequence  SLTDLAVLKIN. . . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISAT. . . . . . . . . . . GRIGLNPTGR
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Template Conservation           
                                                                      
Template Sequence  NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAIT
Template Known Secondary structure  TBS

SS



BTTB



B

TT



TT
S

SSTT
S


SB


TTTS
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   187..190... ......200.........210.........220.........230.........240........
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Query Sequence  QNFLQTD. . . . . ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKL
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Template Sequence  NQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNY. . . . SGVYASVGALRSFIDTY
Template Known Secondary structure  TT

TT


B

TT
TT

TT


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   178.180.........190.........200.........210.........220... ......230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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