Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence97.97%DateThu Jan 5 11:23:07 GMT 2012
Rank284Aligned Residues179
% Identity15%Templated1eufa_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV. . . . . . . ALQDGRVFEALLVGSDSLT. . .
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Template Sequence  PYMAFLLFK. . . . . . . . TSGKSHICGGFLVRED. FVLTAAHCLGSSINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDE
Template Known Secondary structure  TT........SSSSTT.
GGG

S
SBTTS

TT

TT

TT
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   28.30...... ...40.........50.. .......60.........70.........80.........90........
 
   126...130... ......140.........150.........160..... ....170.........180........
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Query Sequence  . . . . DLAVLKIN. . . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLG. . . . . . . . QTITQGIISATGRIGLNPTGRQN
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Template Sequence  TLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPF
Template Known Secondary structure  T
TT

SS




SS







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TT
S
BSSTT

B
SB
B

TTT
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TT
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   189190........ .200.........210.........220.........230.........240.........250
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Query Sequence  FLQTDASINH. . . . . . GNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIR
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Template Sequence  TQICAGDPSKRKNSFSGDSGGPLV. CNGVAQGIVSYGRNDGTT. . . . . . PDVYTRISSFLSWIHSTMR
Template Known Secondary structure  TS
TTS

B

TT
TT
.TT

TT

S......
GGGTT
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   179180.........190.........200.. .......210.........220 .........230.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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