Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence97.49%DateThu Jan 5 11:23:07 GMT 2012
Rank309Aligned Residues180
% Identity17%Templated1eaxa_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100...... ...110.......
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV. . . . . . . . . . . . . . . . . . ALQDGRVFEAL
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Template Sequence  PWQVSLH. . . . . . . . . . ALGQGHICGASLISPN. WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLK
Template Known Secondary structure  TT..........TTT
SSS.
GGGG

BTTB
TT
GGGS

BTT
TTSTT
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   28.30.... .....40.........50 .........60.........70.........80.........90......
 
   118.120..... ....130... ......140.........150.........160.........170......
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Query Sequence  LVGSDSLT. . . . . . . DLAVLKIN. . . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISAT. . . . . . . . .
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Template Sequence  RIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTT
Template Known Secondary structure 
TT

TTT
TT

SS



BTTB


B


TT



TT
SSBSSTTS
B
SB


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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   177..180.........190.........200...... ...210. ........220.........230.........240.......
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Query Sequence  . . . . . GRIGLNPTGRQNFLQTDASINHGNSGGALV. . NSLGE. . LMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDK
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Template Sequence  CENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNK. . . . PGVYTRLPLFRDWIKE
Template Known Secondary structure  STTT

TT
TT
SSB

TT
TT

TTS

SSSS
TT
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SGGG
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   168.170.........180.........190.........200.........210.........220....... ..230.........240...
 
   248.250
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Query Sequence  LIR
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Template Sequence  NTG
Template Known Secondary structure 
Template Predicted Secondary structure 

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   241..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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