Job Description P0AEE3 Confidence 99.82% Date Thu Jan 5 11:23:07 GMT 2012 Rank 30 Aligned Residues 171 % Identity 15% Template d1cqqa_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Resolution 1.85

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	S	Y	N	L	A	V	R	R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	.	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S
Query Conservation																																																								.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.														.										.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		P	E	E	E	F	G	M	S	L	I	K	H	N	S	C	V	I	T	T	.	.	.	.	.	.	.	.	.	.	.	.	E	N	G	K	F	T	G	L	G	V	Y	D	R	.	F	V	V	V	P	T	H	A	D	P	G	K	E	I	Q	V	D	G	I	T	T	K	V	I	D	S	Y	D	L	Y	N	K	N	G	I
Template Known Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	T	T										B	T	.						G	G	G				S					T	T														T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20													.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	.	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		K	L	E	I	T	V	L	K	L	D	R	N	E	K	F	R	D	I	R	R	Y	I	P	N	N	E	D	D	Y	P	N	C	N	L	A	L	L	A	N	Q	P	E	P	T	I	I	N	V	G	D	V	V	S	Y	G	N	I	L	L	S	G	N	Q	T	A	R	M	L	K	Y	S	Y	P	T	K	S	G	Y	C	G
Template Known Secondary structure												S	S			B			G	G	G	G	S		S	S													T	T	S	S	S																		T	T					S										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F
Query Conservation
Alig confidence							.															.	.	.	.	.	.	.	.	.
Template Conservation							.															.	.	.	.	.	.	.	.	.
Template Sequence		G	V	L	Y	K	.	I	G	Q	V	L	G	I	H	V	G	G	N	G	R	.	.	.	.	.	.	.	.	.	D	G	F	S	A	M	L
Template Known Secondary structure							.	T	T											S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.															.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions