Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence94.93%DateThu Jan 5 11:23:07 GMT 2012
Rank364Aligned Residues187
% Identity14%Templated1bqya_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100...... ...110.........120.....
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV. . . . . . . ALQDGRVFEALLVGSDSLT. . .
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Template Sequence  RSLVVL. . . . . . . . . . . FNSNGFLCGGTLINQD. WVVTAAHCDSNNFQLLFGVHSKKILNEDEQTRDPKEKFFCPNRKKD
Template Known Secondary structure  TT...........TT
SSS.
GGG

SS
S
S
SSS

TT



TT

SS
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   28.30... ......40......... 50.........60.........70.........80.........90.....
 
   126...130... ......140.........150.........160..... ....170.........180........
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Query Sequence  . . . . . DLAVLKIN. . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLG. . . . . . . . QTITQGIISATGRIGLNPTGRQN
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Template Sequence  DEVDKDIMLIKLDSSVSNSEHIAPLSLPSSPPSVGSVCRIMGWGKTIPTKEIYPDVPHCANINILDHAVCRTAYSWRQVA
Template Known Secondary structure 
TTTT

SS



BTTB





SS


TT
SS
SSSSS



SS

TTTS


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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   189190........ .200.........210.........220.........230.........240.........250........
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Query Sequence  FLQTDASINH. . . . . . . GNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGY
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Template Sequence  NTTLCAGILQGGRDTCHFDSGGPLI. CNGIFQGIVSWGGHPCGQPGE. . . PGVYTKVFDYLDWIKSIIAGNKDATCP
Template Known Secondary structure  SS
TT
S
B

TT
TT
.TT

SSTT
TT
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GGGGT
TT



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   178.180.........190.........200.. .......210.........220... ......230.........240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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