Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence98.17%DateThu Jan 5 11:23:07 GMT 2012
Rank275Aligned Residues185
% Identity14%Templated1a5ia_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.. .......110.........120...
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD. . . . . . . . . . . . QIIVALQDGRVFEALLVGSDS
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Template Sequence  PWQAAIFAQNRRSSGERF. . . . . LCGGILISSC. WVLTAAHCFQESYLPDQLKVVLGRTYRVKPGEEEQTFKVKKYIVHK
Template Known Secondary structure  TT

SSSS

.....TT.
GGG

S


TTT
S
SSSSS

TT

T
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   28.30.........40..... ....50..... ....60.........70.........80.........90.........100.
 
   124. ....130...... ...140.........150.........160..... ....170.........180.
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Query Sequence  LT. . . . . . . DLAVLKINATG. . . . . . . . GLPTIPINARRVPHIGDVVLAIGNPYNLG. . . . . . . QTITQGIISATGRIGL
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Template Sequence  EFDDDTYNNDIALLQLKSDSPQCAQESDSVRAICLPEANLQLPDWTECELSGYGKHKSSSPFYSEQLKEGHVRLYPSSRC
Template Known Secondary structure  T

TTT
TT


SSS

S

BTTB


B


TT



TT
S
BSSSS
S
B
SS


GGGS
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   182.......190. ........200.........210 .........220.........230.........240.
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Query Sequence  NPTGRQNFLQ. . . . . . . . . . . . . . . . . TDASINHGNSGGALVNSLG. . . ELMGINTLSFDKSNDGETPEGIGFAIPFQLA
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Template Sequence  APKFLFNKTVTNNMLCAGDTRSGEIYPNVHDACQGDSGGPLVCMNDNHMTLLGIISWGVGCGEKDV. . . . PGVYTKVTNY
Template Known Secondary structure  STTTTTT



TT



SSS
SS
S


TT
TT
TT
SSSS
TT
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GGGG
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   169170.........180.........190.........200.........210.........220.........230.... .....240....
 
   242.......250
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Query Sequence  TKIMDKLIR
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Template Sequence  LGWIRDNMH
Template Known Secondary structure  S
Template Predicted Secondary structure 
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   235....240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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