Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence96.74%DateThu Jan 5 11:23:07 GMT 2012
Rank331Aligned Residues179
% Identity11%Templated1a0ja_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100...... ...110.........120....
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV. . . . . . . ALQDGRVFEALLVGSDSL. . . .
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Template Sequence  SYQASLQS. . . . . . . . . . . . GYHFCGGSLISST. WVVSAAHCYKSRIQVRLGEHNIAVNEGTEQFIDSVKVIMHPSYNSR
Template Known Secondary structure  TT............TTSSSS.
GGG

SS
S
SBSSS

S


TT
BTT
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   28.30..... ....40........ .50.........60.........70.........80.........90....
 
   125....130... ......140.........150.........160.........170...... ...180...
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Query Sequence  . . . TDLAVLKIN. . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISAT. . . . . . . . . . . . . . GRIGLNP
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Template Conservation                                                                                  
Template Sequence  NLDNDIMLIKLSKPASLNSYVSTVALPSSCASSGTRCLVSGWGNLSGSSSNYPDTLRCLDLPILSSSSCNSAYPGQITSN
Template Known Secondary structure  TTBT

SS



BTTB


B

SS


TT
SS
S
SSS



SB
B

STTT

TT
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   184.....190.........200.........210.........220.........230.........240.........250..
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Query Sequence  TGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG
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Template Sequence  MFCAGFMEGGKDSCQGDSGGPVV. CNGQLQGVVSWGYGCAQRNK. . . . PGVYTKVCNYRSWISSTMSSN
Template Known Secondary structure  S
TT
S
B

TT
TT
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TT
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   180.........190.........200.. .......210.........220.. .......230.........240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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