Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence98.67%DateThu Jan 5 11:23:07 GMT 2012
Rank212Aligned Residues183
% Identity17%Templatec3nxpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:prethrombin-1; PDBTitle: crystal structure of human prethrombin-1
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90......... 100........ .110.......
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Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVIN. . . . . . . . DADQIIVAL. . . . . . . . . . QDGRVFEAL
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Template Sequence  PWQVMLFR. . . . . . . . . KSPQELLCGASLISDR. WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLE
Template Known Secondary structure  TT.........TTTTSSSS.
GGGT

GGGS

BSSS

TTT

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   428.430..... ....440.........450. ........460.........470.........480.........490.......
 
   118.120.... .....130....... ..140........ .150.........160.. .......170....
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Query Sequence  LVGSDSL. . . . . . . . TDLAVLKINATGG. . . . LPTIPINARRV. . . . PHIGDVVLAIGNPY. . . . . . . NLGQTITQGIIS
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Template Sequence  KIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANQPSVLQVVNLP
Template Known Secondary structure 
TT
BTTTTSBT

SS




SS



B



SSS


SB
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   487..490.........500.........510.........520.........530.........540.........550.........560......
 
   175.. ..180.........190.. .......200...... ...210.........220.........230.......
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Query Sequence  ATG. . . . RIGLNPTGRQNFLQT. . . . . . . . DASINHGNSGGALV. . . . . NSLGELMGINTLSFDKSNDGETPEGIGFAIP
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Template Sequence  IVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRL
Template Known Secondary structure  B

T
SS


TTS


BTTB


TT
S
TT

TTT



SS
TTT

S

TT
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   562.......570.........580.........590.........600.........610.........620.........630.........640.
 
   238.240........
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Query Sequence  FQLATKIMDKL
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Template Sequence  KKWIQKVIDQF
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   635....640.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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