Job Description P0AEE3 Confidence 98.71% Date Thu Jan 5 11:23:07 GMT 2012 Rank 195 Aligned Residues 183 % Identity 13% Template c3h7tB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:group 3 allergen smipp-s yvt004a06; PDBTitle: crystal structure of scabies mite inactivated protease paralogue s-d12 (smipp-s-d1) Resolution 2.00 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	.	.	.	.	.	.	.	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																	.																				.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	W	A	V	G	V	.	.	.	.	.	.	.	.	.	.	.	L	V	D	E	K	P	F	C	G	G	S	I	L	T	A	N	.	F	V	I	T	A	A	Q	C	V	D	G	T	K	P	S	D	I	S	I	H	Y	G	S	S	Y	R	T	T	K	G	T	S	V	M	A	K	K	I	Y	I	V	R	Y	H	P	L
Template Known Secondary structure		T	T					.	.	.	.	.	.	.	.	.	.	.			T	T	S								S	S	S	S	.										T	T			G	G	G						S		S	B	S	S	S	S	S												S		B	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		13	.	.	.	.	.												.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				124	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																			.
Predicted Secondary structure		.	.										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	L	T	D	L	A	V	L	K	I	.	.	.	.	.	.	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation		.	.										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	Q	N	N	Y	A	V	I	E	T	E	M	P	I	K	L	D	D	K	T	T	K	K	I	E	L	P	S	L	L	Y	D	P	E	P	D	T	S	V	L	V	S	G	W	G	S	T	N	F	K	S	L	E	Y	S	G	D	L	M	E	A	N	F	T	V	V	D	R	K	S	C	E	E	Q	Y	K	Q	I	E
Template Known Secondary structure		T	T	B	T								S	S						S	S	S					B				T	T					T	T											S	S	T	T						S	B																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D	G	R	V	I	R
Query Conservation
Alig confidence																																.																			.	.	.	.	.
Template Conservation																																.																			.	.	.	.	.
Template Sequence		A	D	K	Y	I	Y	D	G	V	F	C	A	G	G	E	E	T	Y	I	G	Y	G	D	A	G	D	P	A	V	Q	.	N	G	T	L	V	G	V	A	S	Y	I	S	S	M	P	S	E	F	.	.	.	.	.	P	S	V	F	L	R	V	G	Y	Y	V	L	D	I	K	D	I	I	S	G	K	V	K	P	Q
Template Known Secondary structure			G	G	G		S	T	T										B			T	T		T	T						.	T	T										T	T			T	T	S	.	.	.	.	.																			T	T		S
Template Predicted Secondary structure																																.																			.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions