Job Description P0AEE3 Confidence 98.11% Date Thu Jan 5 11:23:07 GMT 2012 Rank 279 Aligned Residues 181 % Identity 11% Template c3fzzB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:granzyme c; PDBTitle: structure of grc Resolution 2.50 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.																				.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.																				.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	.	.	.	.	.	.	.	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.																				.	.	.
Alig confidence												.	.	.	.	.	.	.																	.																		.	.	.	.	.	.	.																				.	.	.
Template Conservation												.	.	.	.	.	.	.																	.
Template Sequence		P	Y	M	A	Y	Y	E	F	L	K	.	.	.	.	.	.	.	V	G	G	K	K	M	F	C	G	G	F	L	V	R	D	K	.	F	V	L	T	A	A	H	C	K	G	R	S	M	T	V	T	L	G	A	H	N	I	K	A	K	E	E	T	Q	Q	I	I	P	V	A	K	A	I	P	H	P	D	Y	N	P	D
Template Known Secondary structure		T	T									.	.	.	.	.	.	.	S	S	S												T	T	.						T	T											S		S	B	T	T	S			T	T													T	T		B	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.																	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
						126	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																.	180	.
Predicted Secondary structure		.	.	.	.									.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.									.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	L	A	V	L	K	I	N	.	.	.	.	.	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L
Query Conservation		.	.	.	.									.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.									.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	S	N	D	I	M	L	L	K	L	V	R	N	A	K	R	T	R	A	V	R	P	L	N	L	P	R	R	N	A	H	V	K	P	G	D	E	C	Y	V	A	G	W	G	K	V	T	P	D	G	E	F	P	K	T	L	H	E	V	K	L	T	V	Q	K	D	Q	V	C	E	S	Q	F	Q	S	S	Y	N	R
Template Known Secondary structure		T	T	B	T								S	S					B	T	T	B								T	T					T	T								S	S		S	S	T	T	S				S	B								B											T	T	T			T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D
Query Conservation
Alig confidence																											.																		.	.	.	.	.	.
Template Conservation																											.																		.	.	.	.	.	.
Template Sequence		A	N	E	I	C	V	G	D	S	K	I	K	G	A	S	F	E	E	D	S	G	G	P	L	V	.	C	K	R	A	A	A	G	I	V	S	Y	G	Q	T	D	G	S	.	.	.	.	.	.	A	P	Q	V	F	T	R	V	L	S	F	V	S	W	I	K	K	T	M	K	H
Template Known Secondary structure		T	T								S	S		B			T	T	T	T	T	T					.		T	T											T	T		S	.	.	.	.	.	.	S	S						G	G	G	T									T
Template Predicted Secondary structure																											.																		.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions