Job Description P0AEE3 Confidence 97.00% Date Thu Jan 5 11:23:07 GMT 2012 Rank 325 Aligned Residues 181 % Identity 20% Template c2zghA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:granzyme m; PDBTitle: crystal structure of active granzyme m bound to its product Resolution 2.17 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	.	.	.	.	.	.	.	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.																	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																	.																				.	.	.	.	.	.	.																	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	Y	M	A	S	L	.	.	.	.	.	.	.	.	.	.	.	Q	R	N	G	S	H	L	C	G	G	V	L	V	H	P	K	.	W	V	L	T	A	A	H	C	L	A	Q	R	M	A	Q	L	R	L	V	L	G	L	H	T	L	D	S	P	G	L	T	F	H	I	K	A	A	I	Q	H	P	R	Y	K	P	V
Template Known Secondary structure		T	T					.	.	.	.	.	.	.	.	.	.	.			T	T											T	T	.						G	G	G	G		S		G	G	G						S		S	B	S	S	S														T	T		B		T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		13	.	.	.	.	.												.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
						125	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.										.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.										.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	T	D	L	A	V	L	K	I	N	.	.	.	.	.	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	.	.	.	.	.	.	.	.	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q
Query Conservation		.	.	.	.										.	.	.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.										.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	L	E	N	D	L	A	L	L	Q	L	D	G	K	V	K	P	S	R	T	I	R	P	L	A	L	P	S	K	R	Q	V	V	A	A	G	T	R	C	S	M	A	G	W	G	L	T	H	Q	G	G	R	L	S	R	V	L	R	E	L	D	L	Q	V	L	D	T	R	M	C	N	N	S	R	F	W	N	G	S
Template Known Secondary structure		T	S		B	S								S	S						S	S									T	T					T	T										B	S	S	T	T			B		S	B															T	S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		188	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure													.	.	.	.	.	.	.	.												.
Query SS confidence													.	.	.	.	.	.	.	.												.
Query Sequence		N	F	L	Q	T	D	A	S	I	N	H	.	.	.	.	.	.	.	.	G	N	S	G	G	A	L	V	N	S	L	.	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D
Query Conservation													.	.	.	.	.	.	.	.												.
Alig confidence													.	.	.	.	.	.	.	.												.																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		L	S	P	S	M	V	C	L	A	A	D	S	K	D	Q	A	P	C	K	G	D	S	G	G	P	L	V	C	G	K	G	R	V	L	A	G	V	L	S	F	S	S	R	V	C	T	D	I	F	K	.	.	.	P	P	V	A	T	A	V	A	P	Y	V	S	W	I	R	K	V	T	G	R
Template Known Secondary structure				T	T							S	S	T	T		B			T	T		T	T						T	T	T	T											S	S	T	T		T	T	S	.	.	.							S	G	G	G									T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions