Job Description P0AEE3 Confidence 98.23% Date Thu Jan 5 11:23:07 GMT 2012 Rank 269 Aligned Residues 182 % Identity 18% Template c2zchP_ PDB info PDB header:immune system Chain: P: PDB Molecule:prostate-specific antigen; PDBTitle: crystal structure of human prostate specific antigen2 complexed with an activating antibody Resolution 2.83 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.																				.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.																				.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	.	.	.	.	.	.	.	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.																				.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																	.																		.	.	.	.	.	.	.																				.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	W	Q	V	L	V	.	.	.	.	.	.	.	.	.	.	.	A	S	R	G	R	A	V	C	G	G	V	L	V	H	P	Q	.	W	V	L	T	A	A	H	C	I	R	N	K	S	V	I	L	L	G	R	H	S	L	F	H	P	E	D	T	G	Q	V	F	Q	V	S	H	S	F	P	H	P	L	Y	D	M	S
Template Known Secondary structure		T	T					.	.	.	.	.	.	.	.	.	.	.		S	S	S	S										T	T	.						G	G	G			S	S						S		S	B	S	S	S			T	T													T	T	S		G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		28	.	30	.	.	.												.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
						126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																																							.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																																							.	.	.	.	.	.
Query Sequence		.	.	.	.	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	.	.	.	.	.	.
Query Conservation		.	.	.	.																																																																							.	.	.	.	.	.
Alig confidence		.	.	.	.																																																																							.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	K	N	R	F	L	R	P	G	D	D	S	S	H	D	L	M	L	L	R	L	S	E	P	A	E	L	T	D	A	V	K	V	M	D	L	P	T	Q	E	P	A	L	G	T	T	C	Y	A	S	G	W	G	S	I	E	P	E	E	F	L	T	P	K	K	L	Q	C	V	D	L	H	V	I	S	N	D	V	C
Template Known Secondary structure		G	G	T	S	S	S			T	T		B		T	T								S	S						S	S								S	S				T	T								S			S	S	S	S	S					S	B
Template Predicted Secondary structure
Template SS confidence

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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